Gene flow and genetic structure of the aquatic macrophyte Sparganium emersum in a linear unidirectional river

1. River systems offer special environments for the dispersal of aquatic plants because of the unidirectional (downstream) flow and linear arrangement of suitable habitats.
2. To examine the effect of this flow on microevolutionary processes in the unbranched bur-reed ( Sparganium emersum ) we studied the genetic variation within and among nine (sub)populations along a 103 km stretch of the Niers River (Germany–The Netherlands), using amplified fragment length polymorphisms.
3. Genetic diversity in S. emersum populations increased significantly downstream, suggesting an effect of flow on the pattern of intrapopulation genetic diversity.
4. Gene flow in the Niers River is asymmetrically bidirectional, with gene flow being approximately 3.5 times higher in a downstream direction. The observed asymmetry is probably caused by frequent hydrochoric dispersal towards downstream locations on the one hand, and sporadic zoochoric dispersal in an upstream direction on the other. The spread of vegetative propagules (leaf and stem fragments) is probably not an important mode of dispersal for S. emersum , suggesting that gene flow is mainly via seed dispersal. Realized dispersal distances exceeded 60 km, revealing a potential for long-distance dispersal in S. emersum .
5. There was no correlation between geographical and genetic distances among the nine S. emersum populations (i.e. no isolation by distance), which may be due to the occurrence of long-distance dispersal and/or colonization and extinction dynamics in the Niers River.
6. Overall, the genetic population structure and regional dispersal patterns of S. emersum in the Niers River are best explained by a linear metapopulation model. Our study shows that flow can exert a strong influence on population genetic processes of plants inhabiting stream systems.     

From genes to ecosystems: a synthesis of the effects of plant genetic factors across levels of organization

Using two genetic approaches and seven different plant systems, we present findings from a meta-analysis examining the strength of the effects of plant genetic introgression and genotypic diversity across individual, community and ecosystem levels with the goal of synthesizing the patterns to date. We found that (i) the strength of plant genetic effects can be quite high; however, the overall strength of genetic effects on most response variables declined as the levels of organization increased. (ii) Plant genetic effects varied such that introgression had a greater impact on individual phenotypes than extended effects on arthropods or microbes/fungi. By contrast, the greatest effects of genotypic diversity were on arthropods. (iii) Plant genetic effects were greater on above-ground versus below-ground processes, but there was no difference between terrestrial and aquatic environments. (iv) The strength of the effects of intraspecific genotypic diversity tended to be weaker than interspecific genetic introgression. (v) Although genetic effects generally decline across levels of organization, in some cases they do not, suggesting that specific organisms and/or processes may respond more than others to underlying genetic variation. Because patterns in the overall impacts of introgression and genotypic diversity were generally consistent across diverse study systems and consistent with theoretical expectations, these results provide generality for understanding the extended consequences of plant genetic variation across levels of organization, with evolutionary implications.     

Managing genetic variation in tropical trees: linking knowledge with action in agroforestry ecosystems for improved conservation and enhanced livelihoods

Tree species in agroforestry ecosystems contribute to the livelihoods of rural communities and play an important role in the conservation of biodiversity. Unless agroforestry landscapes are productive, however, farmers will not maintain or enhance the range and quality of tree species in them, and both income opportunities and biodiversity will be lost. Productivity depends on both tree species diversity and genetic (intra-specific) variation, but research on the latter has until recently not received the recognition it deserves. Worse, when knowledge on tree genetic variation in agroforestry systems has become available, it has not generally been linked in any systematic way with management, indicating a disjunction between research and field-level practice. In this essay, we attempt to bridge this gap by considering three questions: why is genetic diversity important in tree species? What is our current state of knowledge about intra-specific variation in trees in agroforestry systems? And, finally, what practical interventions are possible to support the conservation of this diversity in agricultural landscapes, while enhancing farmers’ livelihoods? A wide genetic base in agroforestry trees is essential to prevent inbreeding depression and allow adaptation to changing environmental conditions and to altering markets for tree products. Recent evidence shows, however, that many species are subject to poor germplasm collection practice, occur at low densities in farmland, and are found in highly aggregated distributions, all of which observations raise concerns about productivity and sustainability. A range of germplasm-access based interventions is necessary to improve current management, including the enhancement of community seed- and seedling-exchange networks, and the development of locally based tree domestication activities. Equally necessary, but more difficult to address, is the development of markets that support genetic diversity in tropical tree species; we discuss approaches by which this may be undertaken.     

浑善达克退化沙地草地生态恢复试验研究

选择草地退化十分严重的浑善达克沙地腹地开展恢复生态学研究 ,试图寻求沙地草地生态恢复的新途径。采取“以地养地”模式 ,在小范围的土地上 ,建立高产饲草基地 ,使牲畜的压力逐步向高效地集中 ,同时改变畜群结构 ,解决当地牧民生活出路 ;而大面积的退化草地 ,主要借助自然力恢复。结果表明 ,自然力在浑善达克沙地退化生态系统恢复中起到巨大的作用 ,群落生物量、平均高度和总盖度 2年后均随恢复时间增加而增加 ( P<0 .0 5 )。流动沙丘的裸沙 ,经 2 a自然恢复后 ,生物量达 1 0 1 2 g/m,总盖度高达 60 %。与对照相比 ,封育 2 a后固定沙地群落盖度增加近 3倍 ;滩地群落生物量提高了 9倍 ,平均高度增加 4倍。植被组成方面 ,恢复前固定沙地以冷蒿 ( Artemisia frigida)、糙隐子草 ( Cleistogens squarrosa)和寸草苔 ( Carexduriuscula)等为主 ,恢复 2 a后冰草 ( Agropyron cristatum)、褐沙蒿 ( Artemisia intramongolica)等占优势 ;滩地植被中 ,羊草 ( L eymus chinensis)、披碱草 ( Elymus dahuricus)等逐步取代了灰绿藜 ( Chenopodiumglaucum)和尖头叶藜 ( Chenopodium acuminatum)等。生态恢复不仅使自然生态系统得以保护 ,而且带动了社会经济的发展 ,项目中的正蓝旗巴音胡舒嘎查牧民 ,在实验示范前后     

Life-history traits of lake plankton species may govern their phenological response to climate warming

A prominent response of temperate aquatic ecosystems to climate warming is changes in phenology – advancements or delays in annually reoccurring events in an organism's life cycle. The exact seasonal timing of warming, in conjunction with species-specific life-history events such as emergence from resting stages, timing of spawning, generation times, or stage-specific prey requirements, may determine the nature of a species' response. We demonstrate that recent climate-induced shifts in the phenology of lake phytoplankton and zooplankton species in a temperate eutrophic lake (Müggelsee, Germany) differed according to differences in their characteristic life cycles. Fast-growing plankton in spring (diatoms, Daphnia ) showed significant and synchronous forward movements by about 1 month, induced by concurrent earlier ice break-up dates (diatoms) and higher spring water temperature ( Daphnia ). No such synchrony was observed for slow-growing summer zooplankton species with longer and more complex life cycles (copepods, larvae of the mussel Dreissena polymorpha ). Although coexisting, the summer plankton responded species specifically to seasonal warming trends, depending on whether the timing of warming matched their individual thermal requirements at decisive developmental stages such as emergence from diapause (copepods), or spawning ( Dreissena ). Others did not change their phenology significantly, but nevertheless, increased in abundances. We show that the detailed seasonal pattern of warming influences the response of phyto- and zooplankton species to climate change, and point to the diverse nature of responses for species exhibiting complex life-history traits.     

Relationships among biological elements (macrophytes, macroinvertebrates and ichthyofauna) for different core river types across Europe at two different spatial scales

The objective of this study was to evaluate differences in correlations among Biological Elements and environmental parameters for different river types, analysed at two different spatial scales. A total of 82 sites, with at least good ecological status, were sampled across Europe, representing three core river types: Mountain rivers (26 sites); Lowland rivers (29 sites) and Mediterranean rivers (17 sites). At each site samples of macrophytes, macroinvertebrates and fishes were taken during spring, following the methodological procedures established by the European STAR project. Environmental parameters were also recorded, based on a site protocol developed by the European projects AQEM and STAR. Environmental parameters were divided into three categories: aquatic habitats (mesohabitat scale), global features (reach scale) and obligatory typology parameters of Water Framework Directive (WFD) (geographical scale). Data were analysed to evaluate at the two scales, first, relationships among biological elements, and second, relationships between biological elements and environmental parameters. Within each river type, correlation matrices (Bray–Curtis distance) were calculated separately for each biological element and for each category of environmental parameters. All biological elements were correlated (p<0.01) to the larger spatial scale: macrophytes and macroinvertebrates are more correlated in lowland and mountain rivers, while in Mediterranean rivers, fish and macrophytes presented higher correlations. These links tend to be consistent for different spatial scales, except if they are weak on a larger regional scale, obligatory parameters of WFD were, in most cases, significantly correlated with the three biological communities (p<0.05). Results at different spatial scales supported the hierarchical theory of river formation. Reach and mesohabitat environmental parameters tend to explain aquatic communities at a lower spatial scale, while geographical parameters tend to explain the communities at a major spatial scale.     

Temporal and Spatial Distribution Patterns of Larval Trichoptera in Madeiran Streams

Temporal and spatial distribution patterns of lotic larval trichopteran assemblages in relation to environmental variables were investigated in Madeiran streams using multivariate analyses. TWINSPAN classification detected distinct faunal assemblages related to spatial factors between non-polluted high altitude sites and lower lying enriched sites where tolerant taxa were predominant but showed strong seasonal shifts in species composition and abundance. The 15 TWINSPAN end groups were grouped into five arbitrary clusters based upon the seasonal and spatial changes in the trichopteran assemblages detected by the analysis. Significant differences between environmental variables (distance from source, altitude, temperature, conductivity, alkalinity and nitrate) and the trichopteran assemblages (using trichopteran based metrics) of these clusters were confirmed by the Kruskal-Wallis test (H) and Dunn’s test. Chemical classification of samples within the clusters revealed a strong association between trichopteran assemblages and water quality. Canonical Correspondence Analysis and Monte Carlo global permutation tests also identified significant associations between the larval assemblages and physicochemical variables such as temperature and conductivity along a strong physical gradient (altitude, slope) and nitrate along a weaker seasonal gradient. Analysis of functional feeding group distribution patterns clearly showed that mid to high altitude indigenous woodland sites were trophically diverse whilst the lower reaches of the islands streams are trophically impoverished with strong seasonal shifts between two feeding groups of enrichment tolerant taxa. Trichopteran shredders are exclusive to indigenous woodland sites, indicating a limited distribution associated with land use, allochthonous input and habitat destruction. The results indicate that several ‘environmental filters’ operate at different levels upon the islands trichopteran fauna, producing temporally and spatially distinct ‘subsets’ of species best able to exploit conditions and resources at a given site or time, confounding the direct comparison of these insular systems with the findings of the River Continuum Concept, traditionally associated with unaffected continental lotic systems.     

陆地生态系统碳平衡主要研究方法评述

陆地生态系统碳平衡是全球变化科学中的核心问题之一,目前也是生态科学中的前沿与热点问题,而陆地生态系统的复杂性与不确定性决定了对陆地生态系统碳平衡估测的复杂性和不确定性。为研究这一复杂性问题,已发展了许多研究方法。可分为“自下而上”与“自上而下”两种,各种方法都有其自身的优势和劣势。相关方向也已经有了大量的研究报道,但是,不同的研究由于在方法、时间与空间尺度等存在的差异,使得许多研究结果和预测很难被有效的整合或适用于大范围甚至全球水平。综述了陆地碳平衡的主要研究方法,分析和比较了各方法的特点,指出在研究中对不同方法的结果进行分析和比较,以及采用综合方法的必要性。     

Are Water Beetles Good Indicators of Biodiversity in Mediterranean Aquatic Ecosystems? The Case of the Segura River Basin (SE Spain)

Water beetles were examined for use as potential biodiversity indicators in continental aquatic ecosystems in a semiarid Mediterranean region, the Segura river basin (SE Spain). The indicator value of water beetles was investigated by examining the degree to which their species richness patterns was correlated with other groups (Plecoptera, Trichoptera, Mollusca, Heteroptera and Ephemeroptera), and the efficiency of water beetle area networks (selected by complementarity) in conserving overall groups richness. The species richness patterns of Coleoptera, Ephemeroptera, Plecoptera and Trichoptera were significantly correlated with the Remaining Richness value (RR), defined as the total number of species found at a site (of all six groups examined) minus the number of species belonging to the considered indicator group. Area networks for Coleoptera selected by complementarity represented the highest RR percentage (84.46%) and contained more than 78% species of each group. Furthermore, water beetles meet most of the criteria proposed in the literature for choosing biodiversity indicator taxa. In our study, the correlation values and the percentage of species represented by family, genus and species complementary networks were similar and we suggest that the higher taxa of water beetles (genera or families) can be used as biodiversity surrogates for cost-effective practical surveys.     

High resilience of Mediterranean land snail communities to wildfires

In the Mediterranean region, wildfires have devastating effects on animals with limited mobility. With their poor dispersal abilities, their habitats on vegetation and in litter, and their sensitivity to humidity and shade, we expected land snails to be an interesting model to assess short, medium and long-term impact of fires on fauna biodiversity and their resilience. Stratified sampling was carried out on 12 sampling sites in garrigues and forests of Provence (southeastern France), according to fire regime (number of fires, fire intervals and age of the last fire) over the past 30 years. Data were investigated using diversity indexes, Kruskal–Wallis test, dendrogram of affinities and Correspondence Analysis (CA). We found, however, that Mediterranean land snail communities are particularly resilient to fires. Although abundance is drastically reduced in the short-term, species richness and community diversity are preserved provided that the time lapse between two successive fires is longer than the time required for recovery (i.e. around 5 years). This high community resilience in the short-term may be partly due to ecological and ethological aptitudes of land snails. However, these astonishing results, which have implications for conservation biology, are mainly due to the presence, within burned areas, of cryptic refuges that allow initial land snail survival, malacofauna persistence after successive fires and consistent biogeographical patterns in the long-term.